BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F10SP1|AL430580
(924 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1238 1823 0.0
>3x_Contig1238
Length = 5289
Score = 1823 bits (919), Expect = 0.0
Identities = 922/924 (99%)
Strand = Plus / Plus
Query: 1 actattagctggactattagatctgcggagtttgatatatgagtgcatggagattcgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4228 actattagctggactattagatctgcggagtttgatatatgagtgcatggagattcgagg 4287
Query: 61 tacaagtatacctagatttgttgcgtttgatagatttataaagtacccatctaattataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4288 tacaagtatacctagatttgttgcgtttgatagatttataaagtacccatctaattataa 4347
Query: 121 aagggtattttggacgcaggcaaacatttagacatttaactattcgcgtggagtgttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4348 aagggtattttggacgcaggcaaacatttagacatttaactattcgcgtggagtgttcag 4407
Query: 181 tagcaatacagatcttaaccgattttctgaaaatacaatggaagctcaaagccaaggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4408 tagcaatacagatcttaaccgattttctgaaaatacaatggaagctcaaagccaaggtgg 4467
Query: 241 cctcggttctctgttggacatggatttggaaggtttagatttcgagactgcctatgagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4468 cctcggttctctgttggacatggatttggaaggtttagatttcgagactgcctatgagtt 4527
Query: 301 aattaatgagaaagcggaactatgggatgattcaaacgatcaatttcatatgaatcttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4528 aattaatgagaaagcggaactatgggatgattcaaacgatcaatttcatatgaatcttgt 4587
Query: 361 agatgattctcagttcttcaaccatatgactgttgttccagagaatgcttcgacaggagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4588 agatgattctcagttcttcaaccatatgactgttgttccagagaatgcttcgacaggagg 4647
Query: 421 ggatcagcatactaatactgatgaggaagttgacaaagtagtcaatagagatagagcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4648 ggatcagcatactaatactgatgaggaagttgacaaagtagtcaatagagatagagcttt 4707
Query: 481 ccaagaagaaaaagacacaaagccagctgcatcacaaatcacccattctgttcctagtag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4708 ccaagaagaaaaagacacaaagccagctgcatcacaaatcacccattctgttcctagtag 4767
Query: 541 cagaccgcagactccccgaaaccacatttcatcacctttcggggcgtttggtgaacactc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4768 cagaccgcagactccccgaaaccacatttcatcacctttcggggcgtttggtgaacactc 4827
Query: 601 tggaaactcacataacgaaggtttgttgagtgtgaacrngtcgcatgcaattgagcactt 660
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4828 tggaaactcacataacgaaggtttgttgagtgtgaacgagtcgcatgcaattgagcactt 4887
Query: 661 tttggatagtttattaactacctcaccgtcaaaggcttctaatgccgcccttttctctcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4888 tttggatagtttattaactacctcaccgtcaaaggcttctaatgccgcccttttctctcc 4947
Query: 721 gaaactggctcaaaattttatgcgaaatgcggaacatttgggagctgatcctcataccta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4948 gaaactggctcaaaattttatgcgaaatgcggaacatttgggagctgatcctcataccta 5007
Query: 781 tattttcgaccatactgaactacaaaccacaatatccagacatttccaggataagtcaac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5008 tattttcgaccatactgaactacaaaccacaatatccagacatttccaggataagtcaac 5067
Query: 841 cactaagcagggagaaaggctggacacaaagattgccattgcggcatccccatctcatga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5068 cactaagcagggagaaaggctggacacaaagattgccattgcggcatccccatctcatga 5127
Query: 901 agaaaaaaacaataatgtaaattc 924
||||||||||||||||||||||||
Sbjct: 5128 agaaaaaaacaataatgtaaattc 5151
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6225
Number of Sequences: 1807
Number of extensions: 6225
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)